The SBML Test Suite Database publicizes software systems' support of
SBML as determined by their performance on the SBML Test Suite. As a user
of SBML and SBML software, you can use this SBML Test Suite Database to
find the test results for different software systems. If you are a
developer of SBML Software you can also submit results to this database
and thereby make them known to the world.
The following is a list of the test cases in the SBML Test Suite. Click
on the name of a test to see more information about it and a list of the
software tools known in this database to pass that particular test. You
can also use the Filter button to focus the list of cases below on
a narrower subset.
Name
|
Component tags
|
Test tags
|
Brief summary of model
|
01081
|
InitialAssignment,
Compartment,
Species,
Reaction,
Parameter,
|
InitialValueReassigned,
Amount,
AssignedConstantStoichiometry,
NonUnityStoichiometry,
InitialValueReassigned,
|
Basic two reactions with three species in a compartment using initialAssignment to set the initial value of one species.
|
01082
|
InitialAssignment,
Compartment,
Species,
Reaction,
Parameter,
|
InitialValueReassigned,
Amount,
AssignedConstantStoichiometry,
NonUnityStoichiometry,
InitialValueReassigned,
|
Basic two reactions with three species in a compartment using initialAssignment to set the initial value of one species.
|
01083
|
InitialAssignment,
Compartment,
Species,
Reaction,
Parameter,
AlgebraicRule,
|
InitialValueReassigned,
Amount,
AssignedConstantStoichiometry,
NonUnityStoichiometry,
|
Algebraic rule used to determine rate of species change.
|
01084
|
InitialAssignment,
Compartment,
Species,
Reaction,
Parameter,
AlgebraicRule,
|
InitialValueReassigned,
Amount,
AssignedConstantStoichiometry,
NonUnityStoichiometry,
|
Algebraic rule used to determine rate of species change.
|
01085
|
InitialAssignment,
Compartment,
Species,
Reaction,
Parameter,
AlgebraicRule,
|
InitialValueReassigned,
Amount,
AssignedConstantStoichiometry,
NonUnityStoichiometry,
|
Basic two reactions with four species in one compartment with an algebraic rule used to determine rate of change of one species.
|
01086
|
InitialAssignment,
Compartment,
Species,
Reaction,
Parameter,
AlgebraicRule,
|
InitialValueReassigned,
Amount,
AssignedConstantStoichiometry,
NonUnityStoichiometry,
|
Basic two reactions with four species in one compartment with an algebraic rule used to determine rate of change of one species.
|
01087
|
InitialAssignment,
Compartment,
Species,
Reaction,
Parameter,
AssignmentRule,
|
InitialValueReassigned,
Amount,
AssignedConstantStoichiometry,
NonUnityStoichiometry,
InitialValueReassigned,
|
Basic single forward reaction with three species in one compartment using an assignmentRule to vary one species.
|
01088
|
InitialAssignment,
Compartment,
Species,
Reaction,
Parameter,
AssignmentRule,
|
InitialValueReassigned,
Amount,
AssignedConstantStoichiometry,
NonUnityStoichiometry,
InitialValueReassigned,
|
Two reactions with four species in one compartment using an assignmentRule to vary one species.
|
01089
|
InitialAssignment,
Compartment,
Species,
Reaction,
Parameter,
RateRule,
|
InitialValueReassigned,
Amount,
AssignedConstantStoichiometry,
NonUnityStoichiometry,
|
Two reactions and a rate rule with four species in a compartment.
|
01090
|
InitialAssignment,
Compartment,
Species,
Reaction,
Parameter,
RateRule,
|
InitialValueReassigned,
Amount,
AssignedConstantStoichiometry,
NonUnityStoichiometry,
|
One reactions and two rate rules with four species in a compartment.
|
01091
|
InitialAssignment,
Compartment,
Species,
Reaction,
Parameter,
FunctionDefinition,
RateRule,
|
InitialValueReassigned,
Amount,
AssignedConstantStoichiometry,
NonUnityStoichiometry,
|
Two reactions and a rate rule that applies a functionDefinition with four species in a compartment.
|
01092
|
InitialAssignment,
Compartment,
Species,
Reaction,
Parameter,
RateRule,
AssignmentRule,
|
InitialValueReassigned,
Amount,
AssignedConstantStoichiometry,
NonUnityStoichiometry,
InitialValueReassigned,
|
Two reactions with four species in one compartment using an assignmentRule and a rateRule to vary species.
|
01093
|
InitialAssignment,
Compartment,
Species,
Reaction,
Parameter,
RateRule,
|
InitialValueReassigned,
Amount,
AssignedConstantStoichiometry,
NonUnityStoichiometry,
InitialValueReassigned,
|
One reactions and two rate rules with four species in a compartment.
|
01094
|
InitialAssignment,
Compartment,
Species,
Reaction,
Parameter,
RateRule,
EventNoDelay,
|
InitialValueReassigned,
Amount,
AssignedConstantStoichiometry,
NonUnityStoichiometry,
|
One reactions and two rate rules with four species in a compartment.
|
01095
|
InitialAssignment,
Compartment,
Species,
Reaction,
Parameter,
RateRule,
EventWithDelay,
|
InitialValueReassigned,
Amount,
AssignedConstantStoichiometry,
NonUnityStoichiometry,
|
Two reactions and a rate rule with four species in a compartment.
|
01096
|
InitialAssignment,
Compartment,
Species,
Reaction,
Parameter,
|
InitialValueReassigned,
Amount,
AssignedConstantStoichiometry,
NonUnityStoichiometry,
|
Single reversible reaction.
|
01097
|
InitialAssignment,
Compartment,
Species,
Reaction,
Parameter,
|
InitialValueReassigned,
Amount,
AssignedConstantStoichiometry,
NonUnityStoichiometry,
|
Single reversible reaction.
|
01098
|
InitialAssignment,
Compartment,
Species,
Reaction,
Parameter,
|
InitialValueReassigned,
Amount,
AssignedConstantStoichiometry,
NonUnityStoichiometry,
|
Single reversible reaction.
|
01099
|
InitialAssignment,
Compartment,
Species,
Reaction,
Parameter,
CSymbolTime,
|
InitialValueReassigned,
Amount,
AssignedConstantStoichiometry,
NonUnityStoichiometry,
|
Basic single forward reaction with two species in one compartment using csymbol time within a math expression.
|
01100
|
Compartment,
Species,
Reaction,
Parameter,
CSymbolTime,
InitialAssignment,
|
InitialValueReassigned,
Amount,
AssignedConstantStoichiometry,
NonUnityStoichiometry,
|
Linear chain of reactions in one compartment using csymbol time within a math expression.
|