The SBML Test Suite Database publicizes software systems' support of
SBML as determined by their performance on the SBML Test Suite. As a user
of SBML and SBML software, you can use this SBML Test Suite Database to
find the test results for different software systems. If you are a
developer of SBML Software you can also submit results to this database
and thereby make them known to the world.
The following is a list of the test cases in the SBML Test Suite. Click
on the name of a test to see more information about it and a list of the
software tools known in this database to pass that particular test. You
can also use the Filter button to focus the list of cases below on
a narrower subset.
Name
|
Component tags
|
Test tags
|
Brief summary of model
|
01186
|
Compartment,
Reaction,
Species,
fbc:FluxBound,
fbc:FluxObjective,
fbc:Objective,
|
BoundaryCondition,
NonUnityStoichiometry,
fbc:BoundGreaterEqual,
fbc:BoundLessEqual,
fbc:MaximizeObjective,
|
Maximize single objective function, hard bounds.
|
01187
|
Compartment,
Reaction,
Species,
fbc:FluxBound,
fbc:FluxObjective,
fbc:Objective,
|
BoundaryCondition,
NonUnityStoichiometry,
fbc:BoundGreaterEqual,
fbc:BoundLessEqual,
fbc:MinimizeObjective,
|
Minimize single objective function, hard bounds.
|
01188
|
Compartment,
Reaction,
Species,
fbc:FluxBound,
fbc:FluxObjective,
fbc:Objective,
|
BoundaryCondition,
NonUnityStoichiometry,
fbc:BoundGreaterEqual,
fbc:BoundLessEqual,
fbc:MaximizeObjective,
|
Maximize single objective function, infinite bounds.
|
01189
|
Compartment,
Reaction,
Species,
fbc:FluxBound,
fbc:FluxObjective,
fbc:Objective,
|
BoundaryCondition,
NonUnityStoichiometry,
fbc:BoundGreaterEqual,
fbc:BoundLessEqual,
fbc:MinimizeObjective,
|
Minimize single objective function, infinite bounds.
|
01190
|
Compartment,
Reaction,
Species,
fbc:FluxBound,
fbc:FluxObjective,
fbc:Objective,
|
BoundaryCondition,
NonUnityStoichiometry,
fbc:BoundGreaterEqual,
fbc:BoundLessEqual,
fbc:MaximizeObjective,
|
Maximize single objective function, non-unitary objective flux coefficient
|
01191
|
Compartment,
Reaction,
Species,
fbc:FluxBound,
fbc:FluxObjective,
fbc:Objective,
|
BoundaryCondition,
NonUnityStoichiometry,
fbc:BoundGreaterEqual,
fbc:BoundLessEqual,
fbc:MaximizeObjective,
fbc:MinimizeObjective,
|
Multiple objectives defined, optimize active one (maximize)
|
01192
|
Compartment,
Reaction,
Species,
fbc:FluxBound,
fbc:FluxObjective,
fbc:Objective,
|
BoundaryCondition,
NonUnityStoichiometry,
fbc:BoundGreaterEqual,
fbc:BoundLessEqual,
fbc:MaximizeObjective,
|
Single objective, multiple flux objectives
|
01193
|
Compartment,
Reaction,
Species,
fbc:FluxBound,
fbc:FluxObjective,
fbc:Objective,
|
BoundaryCondition,
NonUnityStoichiometry,
fbc:BoundGreaterEqual,
fbc:BoundLessEqual,
fbc:MaximizeObjective,
|
Single objective, test R07 GE 0.5, R10 GE 0.5
|
01194
|
Compartment,
Reaction,
Species,
fbc:FluxBound,
fbc:FluxObjective,
fbc:Objective,
|
BoundaryCondition,
NonUnityStoichiometry,
fbc:BoundGreaterEqual,
fbc:BoundLessEqual,
fbc:MaximizeObjective,
|
Single objective, test R07 LE 0.2, R10 LE 0.3
|
01195
|
Compartment,
Reaction,
Species,
fbc:FluxBound,
fbc:FluxObjective,
fbc:Objective,
|
BoundaryCondition,
NonUnityStoichiometry,
fbc:BoundEqual,
fbc:BoundGreaterEqual,
fbc:BoundLessEqual,
fbc:MaximizeObjective,
|
Single objective, test: R07 EQ 0.2, R10 EQ 0.2, R25 EQ 0.6
|
01196
|
Compartment,
Reaction,
Species,
fbc:FluxBound,
fbc:FluxObjective,
fbc:Objective,
|
BoundaryCondition,
NonUnityStoichiometry,
fbc:BoundGreaterEqual,
fbc:BoundLessEqual,
fbc:MaximizeObjective,
|
Infeasible solution, should return a nan
|
01625
|
Compartment,
Reaction,
Species,
fbc:FluxBound,
fbc:FluxObjective,
fbc:Objective,
|
BoundaryCondition,
NonUnityStoichiometry,
fbc:BoundEqual,
fbc:BoundGreaterEqual,
fbc:BoundLessEqual,
fbc:MinimizeObjective,
|
FBC minimization test with a flux set to equal a particular value.
|