The SBML Test Suite Database publicizes software systems' support of
SBML as determined by their performance on the SBML Test Suite. As a user
of SBML and SBML software, you can use this SBML Test Suite Database to
find the test results for different software systems. If you are a
developer of SBML Software you can also submit results to this database
and thereby make them known to the world.
The following is a list of the test cases in the SBML Test Suite. Click
on the name of a test to see more information about it and a list of the
software tools known in this database to pass that particular test. You
can also use the Filter button to focus the list of cases below on
a narrower subset.
Name
|
Component tags
|
Test tags
|
Brief summary of model
|
01128
|
Parameter,
comp:ModelDefinition,
comp:ReplacedBy,
comp:Submodel,
|
|
A hierarchical model testing ReplacedBy
|
01133
|
Compartment,
Species,
comp:ModelDefinition,
comp:ReplacedBy,
comp:ReplacedElement,
comp:SBaseRef,
comp:Submodel,
|
Concentration,
ConstantSpecies,
MultiCompartment,
NonUnityCompartment,
comp:SubmodelOutput,
|
A species replacing one thing and replaced by something else.
|
01134
|
Compartment,
Species,
comp:ModelDefinition,
comp:Port,
comp:ReplacedBy,
comp:ReplacedElement,
comp:SBaseRef,
comp:Submodel,
|
Concentration,
MultiCompartment,
NonUnityCompartment,
comp:SubmodelOutput,
|
A species replacing one thing and replaced by something else, with ports.
|
01135
|
Parameter,
comp:ModelDefinition,
comp:ReplacedBy,
comp:SBaseRef,
comp:Submodel,
|
|
Hierarchical model with chained replacedBys.
|
01136
|
Parameter,
comp:ModelDefinition,
comp:ReplacedBy,
comp:SBaseRef,
comp:ReplacedElement,
comp:Submodel,
|
|
Chained replaced/replacedBy elements.
|
01142
|
AlgebraicRule,
AssignmentRule,
CSymbolDelay,
CSymbolTime,
Compartment,
EventWithDelay,
InitialAssignment,
Parameter,
RateRule,
Reaction,
Species,
comp:ModelDefinition,
comp:ReplacedBy,
comp:ReplacedElement,
comp:Submodel,
|
Amount,
HasOnlySubstanceUnits,
InitialValueReassigned,
NonConstantParameter,
comp:TimeConversionFactor,
|
A hierarchical model with a time conversion factor affecting many components.
|
01170
|
CSymbolTime,
Compartment,
Parameter,
Reaction,
Species,
comp:ModelDefinition,
comp:ReplacedBy,
comp:ReplacedElement,
comp:Submodel,
|
Amount,
HasOnlySubstanceUnits,
comp:TimeConversionFactor,
|
A hierarchical model with a time conversion factor.
|
01175
|
CSymbolTime,
Compartment,
Parameter,
Reaction,
Species,
comp:ModelDefinition,
comp:ReplacedBy,
comp:ReplacedElement,
comp:Submodel,
|
Amount,
HasOnlySubstanceUnits,
comp:TimeConversionFactor,
|
A hierarchical model with a time conversion factor and reaction.
|
01176
|
AssignmentRule,
CSymbolDelay,
CSymbolTime,
Compartment,
Parameter,
Reaction,
Species,
comp:ModelDefinition,
comp:ReplacedBy,
comp:ReplacedElement,
comp:Submodel,
|
Amount,
HasOnlySubstanceUnits,
InitialValueReassigned,
NonConstantParameter,
comp:TimeConversionFactor,
|
A hierarchical model with a time conversion factor and a delay in a kinetic law.
|
01374
|
CSymbolTime,
Compartment,
EventNoDelay,
EventPriority,
Parameter,
Species,
comp:ModelDefinition,
comp:ReplacedBy,
comp:ReplacedElement,
comp:Submodel,
|
Amount,
BoundaryCondition,
NonConstantParameter,
comp:SubmodelOutput,
|
A replaced species whose ID is used in an event priority.
|
01376
|
CSymbolTime,
Compartment,
EventWithDelay,
Parameter,
Species,
comp:ModelDefinition,
comp:ReplacedBy,
comp:ReplacedElement,
comp:Submodel,
|
Amount,
BoundaryCondition,
NonConstantParameter,
comp:SubmodelOutput,
|
A replaced species whose ID is used in an event delay.
|
01377
|
AlgebraicRule,
Compartment,
Parameter,
Species,
comp:ModelDefinition,
comp:ReplacedBy,
comp:ReplacedElement,
comp:Submodel,
|
Amount,
BoundaryCondition,
ConstantSpecies,
InitialValueReassigned,
comp:SubmodelOutput,
|
A replaced species whose ID is used in an algebraic rule.
|
01379
|
Compartment,
Parameter,
RateRule,
Species,
comp:ModelDefinition,
comp:ReplacedBy,
comp:ReplacedElement,
comp:Submodel,
|
Amount,
BoundaryCondition,
NonConstantParameter,
comp:SubmodelOutput,
|
A replaced species whose ID is used in a rate rule.
|
01470
|
Compartment,
Parameter,
Reaction,
Species,
comp:ModelDefinition,
comp:ReplacedBy,
comp:SBaseRef,
comp:Submodel,
|
Amount,
HasOnlySubstanceUnits,
comp:ExtentConversionFactor,
|
A hierarchical model with a reaction modified by an extent conversion factor.
|
01471
|
Compartment,
Reaction,
Species,
comp:Deletion,
comp:ExternalModelDefinition,
comp:ModelDefinition,
comp:Port,
comp:ReplacedBy,
comp:ReplacedElement,
comp:Submodel,
|
Amount,
comp:SubmodelOutput,
|
Replacements in external models
|
01472
|
Compartment,
Reaction,
Species,
comp:ExternalModelDefinition,
comp:ReplacedBy,
comp:SBaseRef,
comp:Submodel,
|
Amount,
comp:SubmodelOutput,
|
An element in an external model submodel as the target of a replacedBy element.
|