The SBML Test Suite Database publicizes software systems' support of
SBML as determined by their performance on the SBML Test Suite. As a user
of SBML and SBML software, you can use this SBML Test Suite Database to
find the test results for different software systems. If you are a
developer of SBML Software you can also submit results to this database
and thereby make them known to the world.
The following is a list of the test cases in the SBML Test Suite. Click
on the name of a test to see more information about it and a list of the
software tools known in this database to pass that particular test. You
can also use the Filter button to focus the list of cases below on
a narrower subset.
Name
|
Component tags
|
Test tags
|
Brief summary of model
|
01198
|
AssignmentRule,
Compartment,
Parameter,
RateRule,
Species,
|
Amount,
BoundaryCondition,
InitialValueReassigned,
NonConstantCompartment,
NonConstantParameter,
NonUnityCompartment,
VolumeConcentrationRates,
|
A species and a compartment both under control of a rate rule.
|
01208
|
AssignmentRule,
Compartment,
Parameter,
RateRule,
Species,
|
Amount,
BoundaryCondition,
InitialValueReassigned,
NonConstantCompartment,
NonConstantParameter,
NonUnityCompartment,
VolumeConcentrationRates,
|
Variable compartment with variable species concentration
|
01454
|
AssignmentRule,
CSymbolDelay,
Compartment,
Parameter,
RateRule,
Species,
|
Amount,
BoundaryCondition,
InitialValueReassigned,
NonConstantCompartment,
NonConstantParameter,
NonUnityCompartment,
VolumeConcentrationRates,
|
A species and a compartment both under control of a rate rule.
|
01462
|
AssignmentRule,
CSymbolRateOf,
Compartment,
Parameter,
RateRule,
Species,
|
Amount,
BoundaryCondition,
InitialValueReassigned,
NonConstantCompartment,
NonConstantParameter,
NonUnityCompartment,
VolumeConcentrationRates,
|
A species and a compartment both under control of a rate rule.
|
01478
|
AssignmentRule,
Compartment,
FunctionDefinition,
Parameter,
RateRule,
Species,
|
Amount,
BoundaryCondition,
InitialValueReassigned,
NonConstantCompartment,
NonConstantParameter,
NonUnityCompartment,
VolumeConcentrationRates,
|
A species and a compartment both under control of a rate rule.
|
01498
|
AssignmentRule,
Compartment,
InitialAssignment,
Parameter,
RateRule,
Reaction,
Species,
|
Amount,
AssignedConstantStoichiometry,
BoundaryCondition,
InitialValueReassigned,
NonConstantCompartment,
NonConstantParameter,
NonUnityCompartment,
NonUnityStoichiometry,
SpeciesReferenceInMath,
VolumeConcentrationRates,
|
A species and a compartment both under control of a rate rule.
|
01504
|
AssignmentRule,
CSymbolTime,
Compartment,
EventNoDelay,
Parameter,
RateRule,
Species,
|
Amount,
BoundaryCondition,
InitialValueReassigned,
NonConstantCompartment,
NonConstantParameter,
NonUnityCompartment,
VolumeConcentrationRates,
|
A species and a compartment both under control of a rate rule, then modified by an event.
|
01505
|
AssignmentRule,
CSymbolTime,
Compartment,
EventNoDelay,
Parameter,
RateRule,
Species,
|
Amount,
BoundaryCondition,
InitialValueReassigned,
NonConstantCompartment,
NonConstantParameter,
NonUnityCompartment,
VolumeConcentrationRates,
|
A species and a compartment both under control of a rate rule, and affected by an event.
|
01506
|
AssignmentRule,
CSymbolTime,
Compartment,
EventNoDelay,
Parameter,
RateRule,
Species,
|
Amount,
BoundaryCondition,
InitialValueReassigned,
NonConstantCompartment,
NonConstantParameter,
NonUnityCompartment,
VolumeConcentrationRates,
|
A species and a compartment both under control of a rate rule, and affected by an event.
|
01507
|
AssignmentRule,
CSymbolTime,
Compartment,
EventWithDelay,
Parameter,
RateRule,
Species,
|
Amount,
BoundaryCondition,
InitialValueReassigned,
NonConstantCompartment,
NonConstantParameter,
NonUnityCompartment,
VolumeConcentrationRates,
|
A species and a compartment both under control of a rate rule, then modified by an event.
|
01508
|
AssignmentRule,
CSymbolTime,
Compartment,
EventWithDelay,
Parameter,
RateRule,
Species,
|
Amount,
BoundaryCondition,
EventUsesTriggerTimeValues,
InitialValueReassigned,
NonConstantCompartment,
NonConstantParameter,
NonUnityCompartment,
VolumeConcentrationRates,
|
A species and a compartment both under control of a rate rule, then modified by an event.
|
01509
|
AssignmentRule,
CSymbolTime,
Compartment,
EventWithDelay,
Parameter,
RateRule,
Species,
|
Amount,
BoundaryCondition,
EventUsesAssignmentTimeValues,
InitialValueReassigned,
NonConstantCompartment,
NonConstantParameter,
NonUnityCompartment,
VolumeConcentrationRates,
|
A species and a compartment both under control of a rate rule, then modified by an event.
|
01510
|
AssignmentRule,
Compartment,
EventNoDelay,
Parameter,
RateRule,
Species,
|
Amount,
BoundaryCondition,
EventT0Firing,
InitialValueReassigned,
NonConstantCompartment,
NonConstantParameter,
NonUnityCompartment,
VolumeConcentrationRates,
|
A species and a compartment both under control of a rate rule, modified by an event at t0.
|
01511
|
AssignmentRule,
Compartment,
EventWithDelay,
Parameter,
RateRule,
Species,
|
Amount,
BoundaryCondition,
EventIsPersistent,
InitialValueReassigned,
NonConstantCompartment,
NonConstantParameter,
NonUnityCompartment,
VolumeConcentrationRates,
|
A species and a compartment both under control of a rate rule, modified by an persistent delayed event.
|
01512
|
AssignmentRule,
CSymbolTime,
Compartment,
EventNoDelay,
EventPriority,
Parameter,
RateRule,
Species,
|
Amount,
BoundaryCondition,
InitialValueReassigned,
NonConstantCompartment,
NonConstantParameter,
NonUnityCompartment,
VolumeConcentrationRates,
|
A species and a compartment both under control of a rate rule,that affects an event priority.
|
01513
|
AssignmentRule,
Compartment,
InitialAssignment,
Parameter,
RateRule,
Species,
|
Amount,
BoundaryCondition,
InitialValueReassigned,
NonConstantCompartment,
NonConstantParameter,
NonUnityCompartment,
VolumeConcentrationRates,
|
A species and a compartment both under control of a rate rule,with an initial assignment to the species.
|
01514
|
AssignmentRule,
Compartment,
InitialAssignment,
Parameter,
RateRule,
Species,
|
Amount,
BoundaryCondition,
InitialValueReassigned,
NonConstantCompartment,
NonConstantParameter,
NonUnityCompartment,
VolumeConcentrationRates,
|
A species and a compartment both under control of a rate rule,with an initial assignment to the species and compartment.
|
01627
|
AssignmentRule,
CSymbolTime,
Compartment,
EventNoDelay,
EventPriority,
Parameter,
RateRule,
Species,
|
EventIsNotPersistent,
InitialValueReassigned,
NonConstantCompartment,
NonConstantParameter,
NonUnityCompartment,
RandomEventExecution,
VolumeConcentrationRates,
|
Competing events with the same priority, jointly causing a parameter to monotonically increase, checking to make sure the two events are not exactly evenly distributed. NOTE: STOCHASTIC TEST. Your software may fail periodically; it is only supposed to succeed in the majority of cases.
|