The SBML Test Suite Database publicizes software systems' support of
SBML as determined by their performance on the SBML Test Suite. As a user
of SBML and SBML software, you can use this SBML Test Suite Database to
find the test results for different software systems. If you are a
developer of SBML Software you can also submit results to this database
and thereby make them known to the world.
The following is a list of the test cases in the SBML Test Suite. Click
on the name of a test to see more information about it and a list of the
software tools known in this database to pass that particular test. You
can also use the Filter button to focus the list of cases below on
a narrower subset.
Name
|
Component tags
|
Test tags
|
Brief summary of model
|
00960
|
CSymbolAvogadro,
InitialAssignment,
Parameter,
|
InitialValueReassigned,
|
Four different ways of writing the avogadro number in an initial assignment.
|
00961
|
AssignmentRule,
CSymbolAvogadro,
Parameter,
|
InitialValueReassigned,
|
Four different ways of writing the avogadro number in an assignment rule.
|
01000
|
AssignmentRule,
CSymbolAvogadro,
CSymbolTime,
Compartment,
EventNoDelay,
EventPriority,
EventWithDelay,
FunctionDefinition,
InitialAssignment,
Parameter,
RateRule,
Reaction,
Species,
|
Amount,
AssignedConstantStoichiometry,
AssignedVariableStoichiometry,
BoundaryCondition,
ConstantSpecies,
ConversionFactors,
EventIsNotPersistent,
EventIsPersistent,
EventT0Firing,
EventUsesAssignmentTimeValues,
EventUsesTriggerTimeValues,
HasOnlySubstanceUnits,
InitialValueReassigned,
LocalParameters,
MultiCompartment,
NonConstantCompartment,
NonConstantParameter,
NonUnityCompartment,
NonUnityStoichiometry,
ReversibleReaction,
SpeciesReferenceInMath,
|
A 'kitchen sink' model with 34 tags. Woo-hoo!
|
01121
|
AssignmentRule,
CSymbolAvogadro,
CSymbolTime,
Compartment,
FunctionDefinition,
InitialAssignment,
Parameter,
RateRule,
Reaction,
Species,
|
Amount,
AssignedConstantStoichiometry,
AssignedVariableStoichiometry,
BoundaryCondition,
ConstantSpecies,
ConversionFactors,
HasOnlySubstanceUnits,
InitialValueReassigned,
LocalParameters,
MultiCompartment,
NonConstantCompartment,
NonConstantParameter,
NonUnityCompartment,
NonUnityStoichiometry,
SpeciesReferenceInMath,
|
A combination test of almost everything but events.
|
01316
|
CSymbolAvogadro,
InitialAssignment,
Parameter,
|
InitialValueReassigned,
|
Use of a csymbol whose putative ID shadows another parameter.
|
01323
|
CSymbolAvogadro,
InitialAssignment,
Parameter,
|
InitialValueReassigned,
|
Initial assignments that test that the appropriate value for avogadro is being used.
|
01479
|
AlgebraicRule,
CSymbolAvogadro,
Parameter,
|
InitialValueReassigned,
|
Using avogadro in an algebraic rule.
|
01641
|
CSymbolAvogadro,
CSymbolTime,
InitialAssignment,
Parameter,
|
InitialValueReassigned,
|
The csymbols avogadro and time with each other's names.
|
01658
|
CSymbolAvogadro,
CSymbolTime,
EventNoDelay,
Parameter,
|
NonConstantParameter,
|
An event with avogadro in the trigger.
|
01659
|
CSymbolAvogadro,
CSymbolTime,
EventWithDelay,
Parameter,
|
NonConstantParameter,
|
An event with avogadro in the delay.
|
01660
|
CSymbolAvogadro,
CSymbolTime,
EventWithDelay,
Parameter,
|
EventIsPersistent,
NonConstantParameter,
|
An event with avogadro in the trigger.
|
01661
|
CSymbolAvogadro,
CSymbolTime,
EventWithDelay,
Parameter,
|
EventIsNotPersistent,
NonConstantParameter,
|
An event with avogadro in the trigger.
|
01662
|
CSymbolAvogadro,
CSymbolTime,
EventNoDelay,
EventPriority,
Parameter,
|
NonConstantParameter,
|
An event with avogadro in the priority.
|
01663
|
CSymbolAvogadro,
EventNoDelay,
Parameter,
|
EventT0Firing,
NonConstantParameter,
|
An event with avogadro in the trigger.
|
01664
|
CSymbolAvogadro,
CSymbolTime,
EventNoDelay,
Parameter,
|
NonConstantParameter,
|
An event with avogadro in an event assignment.
|
01665
|
CSymbolAvogadro,
Parameter,
RateRule,
|
NonConstantParameter,
|
A rate rule that uses avogadro.
|
01722
|
CSymbolAvogadro,
Compartment,
InitialAssignment,
Reaction,
Species,
|
Amount,
AssignedConstantStoichiometry,
InitialValueReassigned,
NonUnityStoichiometry,
|
A stoichiometry set with reference to avogadro.
|
01723
|
CSymbolAvogadro,
Compartment,
RateRule,
Reaction,
Species,
|
Amount,
AssignedVariableStoichiometry,
NonUnityStoichiometry,
|
A stoichiometry change rate set with reference to avogadro.
|
01762
|
CSymbolAvogadro,
Compartment,
Reaction,
Species,
|
Amount,
LocalParameters,
|
A reaction with a local parameter named 'avogadro'.
|
01763
|
CSymbolAvogadro,
Compartment,
Parameter,
Reaction,
Species,
|
Amount,
|
A parameter named 'avogadro' as well as the csymbol avogadro.
|