The SBML Test Suite Database publicizes software systems' support of
SBML as determined by their performance on the SBML Test Suite. As a user
of SBML and SBML software, you can use this SBML Test Suite Database to
find the test results for different software systems. If you are a
developer of SBML Software you can also submit results to this database
and thereby make them known to the world.
The following is a list of the test cases in the SBML Test Suite. Click
on the name of a test to see more information about it and a list of the
software tools known in this database to pass that particular test. You
can also use the Filter button to focus the list of cases below on
a narrower subset.
Name
|
Component tags
|
Test tags
|
Brief summary of model
|
00975
|
Compartment,
Parameter,
Reaction,
Species,
|
Amount,
ConversionFactors,
NonUnityStoichiometry,
|
A three-step reaction scheme with a model conversion factor.
|
00976
|
Compartment,
Parameter,
Reaction,
Species,
|
Amount,
ConversionFactors,
NonUnityStoichiometry,
|
A three-step reaction scheme with a model conversion factor and a species conversion factor.
|
00977
|
Compartment,
Parameter,
Reaction,
Species,
|
Amount,
ConversionFactors,
NonUnityStoichiometry,
|
A three-step reaction scheme with a species conversion factor.
|
01000
|
AssignmentRule,
CSymbolAvogadro,
CSymbolTime,
Compartment,
EventNoDelay,
EventPriority,
EventWithDelay,
FunctionDefinition,
InitialAssignment,
Parameter,
RateRule,
Reaction,
Species,
|
Amount,
AssignedConstantStoichiometry,
AssignedVariableStoichiometry,
BoundaryCondition,
ConstantSpecies,
ConversionFactors,
EventIsNotPersistent,
EventIsPersistent,
EventT0Firing,
EventUsesAssignmentTimeValues,
EventUsesTriggerTimeValues,
HasOnlySubstanceUnits,
InitialValueReassigned,
LocalParameters,
MultiCompartment,
NonConstantCompartment,
NonConstantParameter,
NonUnityCompartment,
NonUnityStoichiometry,
ReversibleReaction,
SpeciesReferenceInMath,
|
A 'kitchen sink' model with 34 tags. Woo-hoo!
|
01121
|
AssignmentRule,
CSymbolAvogadro,
CSymbolTime,
Compartment,
FunctionDefinition,
InitialAssignment,
Parameter,
RateRule,
Reaction,
Species,
|
Amount,
AssignedConstantStoichiometry,
AssignedVariableStoichiometry,
BoundaryCondition,
ConstantSpecies,
ConversionFactors,
HasOnlySubstanceUnits,
InitialValueReassigned,
LocalParameters,
MultiCompartment,
NonConstantCompartment,
NonConstantParameter,
NonUnityCompartment,
NonUnityStoichiometry,
SpeciesReferenceInMath,
|
A combination test of almost everything but events.
|
01402
|
AssignmentRule,
CSymbolRateOf,
Compartment,
Parameter,
Reaction,
Species,
|
Amount,
ConversionFactors,
InitialValueReassigned,
NonConstantParameter,
|
A combination of a model converstion factor and the rateOf function.
|
01403
|
AssignmentRule,
CSymbolDelay,
CSymbolRateOf,
Compartment,
Parameter,
Reaction,
Species,
|
Amount,
ConversionFactors,
InitialValueReassigned,
NonConstantParameter,
|
A model with a rateOf, delay, and model conversion factor.
|
01404
|
AssignmentRule,
CSymbolDelay,
Compartment,
Parameter,
Reaction,
Species,
|
Amount,
ConversionFactors,
InitialValueReassigned,
NonConstantParameter,
|
A combination of a model converstion factor and the delay function.
|
01405
|
AssignmentRule,
CSymbolRateOf,
Compartment,
Parameter,
Reaction,
Species,
|
Amount,
ConversionFactors,
InitialValueReassigned,
NonConstantParameter,
|
A combination of a species converstion factor and the rateOf function.
|
01406
|
AssignmentRule,
CSymbolDelay,
CSymbolRateOf,
Compartment,
Parameter,
Reaction,
Species,
|
Amount,
ConversionFactors,
InitialValueReassigned,
NonConstantParameter,
|
A model with a rateOf, delay, and model conversion factor.
|
01407
|
AssignmentRule,
CSymbolDelay,
Compartment,
Parameter,
Reaction,
Species,
|
Amount,
ConversionFactors,
InitialValueReassigned,
NonConstantParameter,
|
A combination of a species conversion factor and the delay function.
|
01408
|
AssignmentRule,
CSymbolRateOf,
Compartment,
Parameter,
Reaction,
Species,
|
Amount,
ConversionFactors,
InitialValueReassigned,
NonConstantParameter,
|
A combination of a species and model conversion factors and the rateOf function.
|
01409
|
AssignmentRule,
CSymbolDelay,
CSymbolRateOf,
Compartment,
Parameter,
Reaction,
Species,
|
Amount,
ConversionFactors,
InitialValueReassigned,
NonConstantParameter,
|
A model with a rateOf, delay, and model and species conversion factors.
|
01410
|
AssignmentRule,
CSymbolDelay,
Compartment,
Parameter,
Reaction,
Species,
|
Amount,
ConversionFactors,
InitialValueReassigned,
NonConstantParameter,
|
A combination of model and species conversion factors and the delay function.
|
01484
|
AlgebraicRule,
Compartment,
Parameter,
Reaction,
Species,
|
Amount,
ConversionFactors,
InitialValueReassigned,
NonConstantParameter,
|
An algebraic rule with a 'rateOf' csymbol.
|
01499
|
AlgebraicRule,
Compartment,
Parameter,
Reaction,
Species,
|
Amount,
ConversionFactors,
InitialValueReassigned,
NonConstantParameter,
|
A combination of a model converstion factor and an algebraic rule.
|
01500
|
AlgebraicRule,
Compartment,
Parameter,
Reaction,
Species,
|
Amount,
ConversionFactors,
InitialValueReassigned,
NonConstantParameter,
|
A combination of a species converstion factor and an algebraic rule.
|
01501
|
AlgebraicRule,
Compartment,
Parameter,
Reaction,
Species,
|
Amount,
ConversionFactors,
InitialValueReassigned,
NonConstantParameter,
|
A combination of a species and model conversion factors and algebraic rules.
|
01544
|
Compartment,
Parameter,
Reaction,
Species,
|
Amount,
ConversionFactors,
FastReaction,
|
Model and species conversion factors affecting a fast reaction.
|
01545
|
Compartment,
Parameter,
Reaction,
Species,
|
Amount,
ConversionFactors,
FastReaction,
|
A species conversion factor affecting a fast reaction.
|