The SBML Test Suite Database publicizes software systems' support of
SBML as determined by their performance on the SBML Test Suite. As a user
of SBML and SBML software, you can use this SBML Test Suite Database to
find the test results for different software systems. If you are a
developer of SBML Software you can also submit results to this database
and thereby make them known to the world.
The following is a list of the test cases in the SBML Test Suite. Click
on the name of a test to see more information about it and a list of the
software tools known in this database to pass that particular test. You
can also use the Filter button to focus the list of cases below on
a narrower subset.
Name
|
Component tags
|
Test tags
|
Brief summary of model
|
00981
|
AssignmentRule,
CSymbolDelay,
CSymbolTime,
Compartment,
Parameter,
RateRule,
|
NonConstantParameter,
InitialValueReassigned,
|
An assignment rule with a continually-changing delay.
|
00982
|
AssignmentRule,
CSymbolDelay,
CSymbolTime,
Parameter,
RateRule,
|
NonConstantParameter,
InitialValueReassigned,
|
An assignment rule with a continually-changing delay.
|
00983
|
AlgebraicRule,
AssignmentRule,
CSymbolDelay,
CSymbolTime,
Parameter,
RateRule,
|
NonConstantParameter,
InitialValueReassigned,
|
An assignment rule with a continually-changing delay from an algebraic rule.
|
00984
|
AssignmentRule,
CSymbolDelay,
CSymbolTime,
Compartment,
EventNoDelay,
Parameter,
RateRule,
|
NonConstantParameter,
InitialValueReassigned,
|
An assignment rule with a continually-changing delay.
|
00985
|
AssignmentRule,
CSymbolDelay,
Parameter,
RateRule,
|
NonConstantParameter,
InitialValueReassigned,
|
An assignment rule with a continually-changing delay.
|
00986
|
Compartment,
Reaction,
Species,
|
Amount,
FastReaction,
HasOnlySubstanceUnits,
|
A fast and slow reaction, the first of which feeds into the second.
|
00987
|
CSymbolTime,
Compartment,
EventNoDelay,
Parameter,
Reaction,
Species,
|
Amount,
FastReaction,
NonConstantParameter,
HasOnlySubstanceUnits,
|
A fast and slow reaction, the first of which feeds into the second, triggered by an event.
|
00988
|
Compartment,
EventWithDelay,
EventNoDelay,
Parameter,
Reaction,
Species,
|
Amount,
EventIsPersistent,
FastReaction,
NonConstantParameter,
HasOnlySubstanceUnits,
|
A fast and slow reaction, working against each other, with the fast reaction turned on and off by Events.
|
00989
|
StoichiometryMath,
Compartment,
Parameter,
Reaction,
Species,
|
Amount,
AssignedVariableStoichiometry,
DefaultValue,
HasOnlySubstanceUnits,
NonUnityStoichiometry,
|
A simple reaction with stoichiometry the same as its species. For convenience, another reaction is present with the same kinetics, as the species is used in the kinetic law instead.
|
00990
|
StoichiometryMath,
Compartment,
Parameter,
RateRule,
Reaction,
Species,
|
Amount,
AssignedVariableStoichiometry,
DefaultValue,
NonUnityStoichiometry,
NonConstantParameter,
|
A simple reaction with stoichiometry set to a parameter that varies due to a rate law.
|
00991
|
StoichiometryMath,
Compartment,
EventNoDelay,
Parameter,
Reaction,
Species,
|
Amount,
AssignedVariableStoichiometry,
DefaultValue,
NonUnityStoichiometry,
NonConstantParameter,
|
A simple reaction with stoichiometry set to a parameter that varies from an Event.
|
00992
|
StoichiometryMath,
AssignmentRule,
Compartment,
Parameter,
Reaction,
Species,
|
Amount,
AssignedVariableStoichiometry,
DefaultValue,
HasOnlySubstanceUnits,
InitialValueReassigned,
NonUnityStoichiometry,
NonConstantParameter,
|
A simple reaction with stoichiometry set to a parameter, which in turn is set to be the same as its species.
|
00993
|
StoichiometryMath,
AlgebraicRule,
Compartment,
Parameter,
Reaction,
Species,
|
Amount,
AssignedVariableStoichiometry,
DefaultValue,
InitialValueReassigned,
NonConstantParameter,
NonUnityStoichiometry,
|
A simple reaction with stoichiometry set to a parameter, which in turn is set to be the same as its species via an algebraic rule.
|
00994
|
StoichiometryMath,
CSymbolTime,
Compartment,
Parameter,
Reaction,
Species,
|
Amount,
AssignedVariableStoichiometry,
DefaultValue,
NonUnityStoichiometry,
|
A simple reaction with stoichiometry set to be equal to 'time'.
|
00995
|
EventNoDelay,
Parameter,
|
EventT0Firing,
NonConstantParameter,
|
Two events with different 'initialValue's, causing one to fire and one to not fire.
|
00996
|
EventNoDelay,
Parameter,
RateRule,
|
EventT0Firing,
NonConstantParameter,
|
Two events with different 'initialValue's, causing one to fire and one to not fire.
|
00997
|
EventNoDelay,
EventPriority,
Parameter,
|
EventT0Firing,
NonConstantParameter,
|
Two events with different 'initialValue's, causing one to fire and one to not fire.
|
00998
|
Compartment,
Reaction,
Species,
|
Amount,
HasOnlySubstanceUnits,
NonUnityCompartment,
|
Species with an initialConcentration but hasOnlySubstanceUnits="true".
|
00999
|
AssignmentRule,
Compartment,
Parameter,
RateRule,
Species,
|
Amount,
HasOnlySubstanceUnits,
MultiCompartment,
NonConstantCompartment,
NonConstantParameter,
NonUnityCompartment,
InitialValueReassigned,
|
Testing different versions of initialAmount vs. initialConcentration with hasOnlySubstanceUnits=true/false, in a constant and varying compartment.
|
01000
|
AssignmentRule,
CSymbolAvogadro,
CSymbolTime,
Compartment,
EventNoDelay,
EventPriority,
EventWithDelay,
FunctionDefinition,
InitialAssignment,
Parameter,
RateRule,
Reaction,
Species,
|
Amount,
AssignedConstantStoichiometry,
AssignedVariableStoichiometry,
BoundaryCondition,
ConstantSpecies,
ConversionFactors,
EventIsNotPersistent,
EventIsPersistent,
EventT0Firing,
EventUsesAssignmentTimeValues,
EventUsesTriggerTimeValues,
HasOnlySubstanceUnits,
InitialValueReassigned,
LocalParameters,
MultiCompartment,
NonConstantCompartment,
NonConstantParameter,
NonUnityCompartment,
NonUnityStoichiometry,
ReversibleReaction,
SpeciesReferenceInMath,
|
A 'kitchen sink' model with 34 tags. Woo-hoo!
|